STRINGSTRING
Solyc01g081470.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc01g081470.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc01g081470.2.1Uncharacterized protein (292 aa)    
Predicted Functional Partners:
Solyc09g091570.2.1
Uncharacterized protein (505 aa)
   
  0.979
Solyc01g068640.2.1
Uncharacterized protein (604 aa)
   
 
  0.957
Solyc07g042150.2.1
Uncharacterized protein (309 aa)
     
 
  0.938
Solyc05g007200.2.1
Uncharacterized protein (305 aa)
       
      0.901
Solyc12g019010.1.1
Uncharacterized protein (256 aa)
   
   
0.839
Solyc03g119700.2.1
Uncharacterized protein (159 aa)
   
      0.772
Solyc07g055850.2.1
Uncharacterized protein (323 aa)
   
 
  0.751
Solyc05g006810.2.1
Uncharacterized protein (708 aa)
     
  0.734
GPS
Geranyl pyrophosphate synthase (415 aa)
 
   
  0.724
SppS
Solanesyl diphosphate synthase (398 aa)
 
   
  0.722
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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