STRINGSTRING
Solyc01g086650.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc01g086650.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc01g086650.2.1Uncharacterized protein (376 aa)    
Predicted Functional Partners:
Solyc07g066470.2.1
Uncharacterized protein (365 aa)
   
  0.952
Solyc08g069030.2.1
Delta-aminolevulinic acid dehydratase (430 aa)
 
 
  0.891
LOC543967
Glutamate-1-semialdehyde 2,1-aminomutase, chloroplastic (482 aa)
 
 
 
  0.848
Solyc01g106390.2.1
Glutamyl-tRNA reductase (552 aa)
 
 
 
  0.809
nii2
Nitrite reductase (584 aa)
 
   
  0.803
nii1
Nitrite reductase (587 aa)
 
   
  0.800
Solyc02g086560.2.1
Uncharacterized protein (206 aa)
   
 
  0.791
sir
Sulfite reductase (691 aa)
 
   
  0.774
Solyc03g031620.2.1
Uncharacterized protein (456 aa)
 
   
  0.743
LOC544267
Adenylyl-sulfate reductase (461 aa)
 
   
  0.743
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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