STRINGSTRING
Solyc01g087190.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc01g087190.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc01g087190.2.1Uncharacterized protein (221 aa)    
Predicted Functional Partners:
Solyc10g005470.2.1
Uncharacterized protein (139 aa)
   
          0.502
Solyc04g080870.1.1
Uncharacterized protein (86 aa)
   
          0.499
Solyc02g062350.2.1
Uncharacterized protein (270 aa)
   
          0.489
Solyc06g036030.1.1
Uncharacterized protein (132 aa)
   
          0.488
Solyc03g025710.2.1
Uncharacterized protein (281 aa)
   
          0.488
Solyc06g054120.1.1
Uncharacterized protein (495 aa)
   
          0.486
Solyc09g082200.2.1
Uncharacterized protein (555 aa)
   
          0.485
Solyc06g054110.1.1
Uncharacterized protein (170 aa)
   
          0.484
Solyc03g114470.2.1
Uncharacterized protein (251 aa)
   
          0.478
Solyc02g072460.1.1
Uncharacterized protein (154 aa)
   
          0.476
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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