STRINGSTRING
Solyc01g087470.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc01g087470.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc01g087470.2.1Uncharacterized protein (325 aa)    
Predicted Functional Partners:
Solyc11g040390.1.1
Uncharacterized protein (819 aa)
       
 
  0.859
Solyc06g064550.2.1
Uncharacterized protein (919 aa)
       
 
  0.859
Solyc09g008240.2.1
Uncharacterized protein (1314 aa)
       
 
  0.839
Hsp90-1
Molecular chaperone Hsp90-1 (699 aa)
     
  0.710
HSC80
Heat shock cognate protein 80 ; Molecular chaperone that promotes the maturation, structural maintenance and proper regulation of specific target proteins involved for instance in cell cycle control and signal transduction. Undergoes a functional cycle that is linked to its ATPase activity. This cycle probably induces conformational changes in the client proteins, thereby causing their activation. Interacts dynamically with various co-chaperones that modulate its substrate recognition, ATPase cycle and chaperone function (By similarity) (699 aa)
     
  0.710
Solyc03g007890.2.1
Heat shock protein 90 (699 aa)
     
  0.710
Solyc09g037010.1.1
Uncharacterized protein (205 aa)
       
  0.650
Solyc03g051700.1.1
Uncharacterized protein (199 aa)
       
  0.650
Solyc01g109080.2.1
Uncharacterized protein (3719 aa)
       
  0.650
Solyc01g106860.2.1
Uncharacterized protein (84 aa)
       
  0.650
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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