STRINGSTRING
Solyc01g087530.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc01g087530.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc01g087530.2.1Uncharacterized protein (595 aa)    
Predicted Functional Partners:
Solyc12g015660.1.1
Uncharacterized protein (414 aa)
       
 
  0.729
Solyc08g065190.2.1
Uncharacterized protein (407 aa)
       
 
  0.729
Solyc07g065380.2.1
Putative zinc transporter (350 aa)
       
 
  0.729
Solyc07g043230.2.1
Uncharacterized protein (342 aa)
       
 
  0.729
Solyc07g043200.1.1
Uncharacterized protein (342 aa)
       
 
  0.729
Solyc06g005620.2.1
Uncharacterized protein (337 aa)
       
 
  0.729
Solyc05g053370.2.1
ZIP5 (328 aa)
       
 
  0.729
Solyc02g081600.2.1
Uncharacterized protein (352 aa)
       
 
  0.729
Solyc02g069210.2.1
Uncharacterized protein (355 aa)
       
 
  0.729
LOC543597
Iron-regulated transporter 1 (350 aa)
       
 
  0.729
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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