STRINGSTRING
Solyc01g087550.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc01g087550.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc01g087550.2.1Uncharacterized protein (229 aa)    
Predicted Functional Partners:
NIA
Nitrate reductase [NADH] ; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria (912 aa)
     
0.610
Solyc11g072520.1.1
Arogenate dehydratase ; Converts the prephenate produced from the shikimate- chorismate pathway into phenylalanine (393 aa)
       
      0.600
Solyc11g066890.1.1
Arogenate dehydratase ; Converts the prephenate produced from the shikimate- chorismate pathway into phenylalanine (427 aa)
       
      0.600
Solyc06g074530.1.1
Arogenate dehydratase ; Converts the prephenate produced from the shikimate- chorismate pathway into phenylalanine (433 aa)
       
      0.600
Solyc02g080620.2.1
Arogenate dehydratase ; Converts the prephenate produced from the shikimate- chorismate pathway into phenylalanine (400 aa)
       
      0.600
Solyc12g056940.1.1
Uncharacterized protein (2210 aa)
     
 
  0.529
Solyc03g083440.2.1
Uncharacterized protein (2226 aa)
     
   
  0.524
Solyc03g063560.2.1
Uncharacterized protein (1621 aa)
     
   
  0.491
Solyc10g076690.1.1
Uncharacterized protein (240 aa)
           
  0.426
Solyc10g081440.1.1
NADH-cytochrome b5 reductase (278 aa)
     
  0.418
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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