STRINGSTRING
Solyc01g088350.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc01g088350.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc01g088350.2.1Uncharacterized protein (172 aa)    
Predicted Functional Partners:
Solyc11g005060.1.1
Uncharacterized protein (228 aa)
     
  0.881
Solyc10g012160.2.1
Uncharacterized protein (331 aa)
     
  0.874
Solyc12g036790.1.1
Uncharacterized protein (121 aa)
     
  0.867
Solyc09g091170.2.1
Uncharacterized protein (143 aa)
     
    0.860
Solyc08g080240.2.1
Uncharacterized protein (105 aa)
     
    0.859
Solyc03g112810.2.1
Uncharacterized protein (203 aa)
       
    0.850
Solyc07g032420.1.1
Uncharacterized protein (186 aa)
     
  0.828
ndhI
NAD(P)H-quinone oxidoreductase subunit I, chloroplastic ; NDH shuttles electrons from NAD(P)H-plastoquinone, via FMN and iron-sulfur (Fe-S) centers, to quinones in the photosynthetic chain and possibly in a chloroplast respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient (167 aa)
     
  0.812
Solyc10g051350.1.1
Uncharacterized protein (229 aa)
     
  0.812
Solyc02g011780.1.1
Uncharacterized protein (143 aa)
     
  0.812
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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