STRINGSTRING
Solyc01g088470.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc01g088470.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc01g088470.2.1Uncharacterized protein (145 aa)    
Predicted Functional Partners:
Solyc12g098890.1.1
Uncharacterized protein (162 aa)
     
 
    0.806
Solyc03g005180.1.1
Uncharacterized protein (359 aa)
         
 
0.800
Solyc10g055450.1.1
Uncharacterized protein (1846 aa)
     
  0.723
Solyc09g007310.2.1
Uncharacterized protein (1553 aa)
     
  0.723
Solyc01g111530.2.1
Uncharacterized protein (1860 aa)
     
  0.723
Solyc04g054140.2.1
Uncharacterized protein (1292 aa)
     
  0.713
Solyc12g035670.1.1
Uncharacterized protein (1565 aa)
     
      0.634
Solyc06g061120.2.1
Uncharacterized protein (417 aa)
     
      0.634
Solyc01g102970.2.1
Uncharacterized protein (856 aa)
     
 
  0.631
Solyc11g065210.1.1
Uncharacterized protein (534 aa)
     
  0.621
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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