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Solyc01g088470.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc01g088470.2.1" - Ribosomal L18p/L5e family protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc01g088470.2.1Ribosomal L18p/L5e family protein (145 aa)    
Predicted Functional Partners:
101258785
Uncharacterized protein; Ribosomal L28 family (149 aa)
     
 
  0.853
101250874
Ribosomal L18p/L5e family protein (162 aa)
     
 
    0.822
101254165
Ribosomal L18p/L5e family protein (359 aa)
         
 
0.800
101247532
Ribosomal protein L3 family protein; Belongs to the universal ribosomal protein uL3 family (280 aa)
     
 
  0.782
101248086
Ribosomal protein L6 family; Belongs to the universal ribosomal protein uL6 family (257 aa)
     
 
  0.760
101254712
Ribosomal protein L4 (288 aa)
     
 
  0.742
101252524
Uncharacterized protein; Tetratricopeptide repeat (TPR)-like superfamily protein (545 aa)
     
   
  0.741
101247453
Ribonuclease II/R family protein (793 aa)
     
   
  0.659
101268811
Uncharacterized protein; Pentatricopeptide (PPR) repeat-containing protein (459 aa)
     
   
  0.649
101263649
Elongation factor P (EF-P) family protein (229 aa)
     
        0.642
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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