STRINGSTRING
Solyc01g089840.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc01g089840.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc01g089840.2.1Uncharacterized protein (131 aa)    
Predicted Functional Partners:
LOC543967
Glutamate-1-semialdehyde 2,1-aminomutase, chloroplastic (482 aa)
 
  0.969
Solyc03g123880.2.1
Uncharacterized protein (288 aa)
       
 
  0.902
Solyc09g072880.2.1
Uncharacterized protein (291 aa)
     
 
  0.901
Solyc06g008160.2.1
Uncharacterized protein (291 aa)
     
 
  0.901
Solyc02g068350.1.1
Uncharacterized protein (312 aa)
     
 
  0.725
Solyc01g086650.2.1
Uncharacterized protein (376 aa)
     
 
  0.725
Solyc08g069030.2.1
Delta-aminolevulinic acid dehydratase (430 aa)
 
 
  0.717
Solyc07g066470.2.1
Uncharacterized protein (365 aa)
 
   
  0.648
Solyc06g048730.2.1
Uroporphyrinogen decarboxylase (388 aa)
 
   
  0.623
Solyc10g007320.2.1
Uroporphyrinogen decarboxylase (420 aa)
 
   
  0.620
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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