• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
101256217 protein (Solanum lycopersicum) - STRING interaction network
"101256217" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
101256217Uncharacterized protein; glycine-tRNA ligases (1061 aa)    
Predicted Functional Partners:
101249760
Uncharacterized protein; tRNA synthetase class I (I, L, M and V) family protein; Belongs to the class-I aminoacyl-tRNA synthetase family (1110 aa)
   
   
  0.938
101257138
BEST Arabidopsis thaliana protein match is- glycosyltransferase family protein 2 (TAIR-AT5G60700.1); Has 1807 Blast hits to 1807 proteins in 277 species- Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryot /.../39 (source- NCBI BLink) (620 aa)
           
  0.844
101259000
Uncharacterized protein; tRNA synthetase class II (D, K and N) family protein (669 aa)
   
   
  0.809
101257430
annotation not available (738 aa)
     
 
    0.802
101268375
annotation not available (621 aa)
     
 
    0.802
101250341
Uncharacterized protein; Class II aaRS and biotin synthetases superfamily protein (547 aa)
     
   
  0.778
Solyc07g005930.2.1
DNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (992 aa)
     
   
  0.774
101253854
Uncharacterized protein; tRNA synthetase class I (I, L, M and V) family protein; Belongs to the class-I aminoacyl-tRNA synthetase family (1182 aa)
   
   
  0.719
101268563
Unknown protein; LOCATED IN- chloroplast; Has 35333 Blast hits to 34131 proteins in 2444 species- Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source- NCBI BLink) (189 aa)
     
   
  0.699
101261392
annotation not available (649 aa)
         
  0.676
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
Server load: low (6%) [HD]