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STRINGSTRING
Solyc01g090270.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc01g090270.2.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc01g090270.2.1annotation not available (876 aa)    
Predicted Functional Partners:
101262444
Uncharacterized protein; Branchless trichome (252 aa)
           
  0.852
WRKYIIe-1
Uncharacterized protein; WRKY transcription factor IIe-1 (240 aa)
           
  0.766
Solyc12g100360.1.1
Uncharacterized protein; Calpain-type cysteine protease family; Belongs to the peptidase C2 family (2104 aa)
           
  0.763
101251190
annotation not available (328 aa)
           
  0.763
Solyc08g082750.2.1
annotation not available (1611 aa)
           
  0.695
101261639
annotation not available (1008 aa)
           
  0.695
101244514
annotation not available (552 aa)
           
  0.686
101249094
annotation not available (518 aa)
           
  0.686
Solyc00g056680.1.1
annotation not available (537 aa)
           
  0.686
101257311
annotation not available (697 aa)
           
  0.685
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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