STRINGSTRING
Solyc01g090610.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc01g090610.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc01g090610.2.1Uncharacterized protein (315 aa)    
Predicted Functional Partners:
Solyc10g005360.2.1
Uncharacterized protein (289 aa)
   
          0.504
Solyc11g072120.1.1
Uncharacterized protein (257 aa)
   
          0.498
Solyc11g044810.1.1
Uncharacterized protein (250 aa)
   
          0.495
Solyc11g072110.1.1
Uncharacterized protein (357 aa)
   
          0.493
Solyc09g089780.2.1
Uncharacterized protein (352 aa)
   
          0.493
Solyc09g010020.2.1
Uncharacterized protein (360 aa)
   
          0.492
NIA
Nitrate reductase [NADH] ; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria (912 aa)
     
   
  0.489
Solyc10g085190.1.1
Uncharacterized protein (361 aa)
   
          0.489
Solyc09g089580.2.1
1-aminocyclopropane-1-carboxylate oxidase homolog (363 aa)
   
          0.487
ODD
2-oxoglutarate-dependent dioxygenase (364 aa)
   
          0.483
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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