STRINGSTRING
Solyc01g090670.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc01g090670.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc01g090670.2.1Uncharacterized protein (758 aa)    
Predicted Functional Partners:
Solyc12g035650.1.1
Uncharacterized protein (388 aa)
     
  0.999
Solyc12g009390.1.1
Uncharacterized protein (429 aa)
       
      0.988
Solyc04g016240.2.1
Uncharacterized protein (862 aa)
     
  0.987
Solyc10g047000.1.1
Uncharacterized protein (350 aa)
     
  0.974
Solyc11g020200.1.1
Uncharacterized protein (203 aa)
     
  0.973
Solyc11g020190.1.1
Uncharacterized protein (185 aa)
     
  0.973
Solyc11g020180.1.1
Uncharacterized protein (152 aa)
     
  0.973
Solyc11g020160.1.1
Uncharacterized protein (157 aa)
     
  0.973
Solyc11g008130.1.1
Uncharacterized protein (190 aa)
     
  0.973
Solyc11g008120.1.1
Uncharacterized protein (158 aa)
     
  0.973
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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