STRINGSTRING
Solyc01g091140.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc01g091140.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc01g091140.2.1Uncharacterized protein (402 aa)    
Predicted Functional Partners:
Solyc03g083440.2.1
Uncharacterized protein (2226 aa)
   
   
  0.539
Solyc03g063560.2.1
Uncharacterized protein (1621 aa)
         
  0.501
Solyc01g087500.2.1
DNA topoisomerase 2 ; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (1478 aa)
         
  0.491
Solyc01g017740.1.1
Uncharacterized protein (97 aa)
         
  0.484
Solyc04g056540.2.1
Uncharacterized protein (603 aa)
     
   
  0.469
Solyc10g080080.1.1
Thioredoxin reductase (543 aa)
   
 
  0.466
Solyc04g016010.2.1
Uncharacterized protein (537 aa)
   
 
  0.466
Solyc02g081910.1.1
DNA topoisomerase ; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5’-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3’-OH DNA strand (1175 aa)
         
  0.462
Solyc05g014970.2.1
Urea amidohydrolase (834 aa)
           
  0.461
Solyc10g007420.2.1
Uncharacterized protein (425 aa)
   
 
  0.405
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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