STRINGSTRING
ARG1 protein (Solanum lycopersicum) - STRING interaction network
"ARG1" - Arginase 1 in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARG1Arginase 1 (338 aa)    
Predicted Functional Partners:
ODC
Ornithine decarboxylase (431 aa)
       
  0.983
adc1
Arginine decarboxylase (707 aa)
     
  0.982
LOC543960
Arginine decarboxylase (607 aa)
     
  0.981
OAT
Ornithine aminotransferase (425 aa)
   
  0.973
Solyc05g014970.2.1
Urea amidohydrolase (834 aa)
       
  0.963
Solyc03g098310.1.1
Uncharacterized protein (397 aa)
       
  0.955
Solyc03g098300.1.1
Uncharacterized protein (388 aa)
       
  0.955
Solyc12g089210.1.1
Uncharacterized protein (379 aa)
     
  0.950
OTC
Ornithine carbamoyltransferase (374 aa)
     
  0.950
Solyc11g012970.1.1
Uncharacterized protein (308 aa)
     
 
  0.936
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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