• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
ARG1 protein (Solanum lycopersicum) - STRING interaction network
"ARG1" - Arginase 1 in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARG1Arginase 1 ; Belongs to the arginase family (338 aa)    
Predicted Functional Partners:
LOC543960
Arginine decarboxylase ; Belongs to the Orn/Lys/Arg decarboxylase class-II family. SpeA subfamily (607 aa)
   
  0.990
adc1
Arginine decarboxylase ; Belongs to the Orn/Lys/Arg decarboxylase class-II family. SpeA subfamily (707 aa)
   
  0.989
OAT
Uncharacterized protein; Ornithine aminotransferase ; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family (425 aa)
   
  0.986
ODC
Ornithine decarboxylase; Catalyzes the first and rate-limiting step of polyamine biosynthesis that converts ornithine into putrescine, which is the precursor for the polyamines, spermidine and spermine. Polyamines are essential for cell proliferation and are implicated in cellular processes, ranging from DNA replication to apoptosis; Belongs to the Orn/Lys/Arg decarboxylase class-II family (431 aa)
   
 
  0.978
101264119
Urease; In the C-terminal section; belongs to the metallo- dependent hydrolases superfamily. Urease alpha subunit family (834 aa)
       
  0.971
101246902
annotation not available (379 aa)
     
  0.961
OTC
annotation not available (374 aa)
     
  0.961
101265415
annotation not available (397 aa)
   
 
  0.959
101255673
annotation not available (388 aa)
   
 
  0.959
101265059
Arginine biosynthesis bifunctional protein ArgJ, chloroplastic; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis- the synthesis of acetylglutamate from glutamate and acetyl-CoA, and of ornithine by transacetylation between acetylornithine and glutamate (470 aa)
       
  0.957
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
Server load: low (9%) [HD]