STRINGSTRING
Solyc01g091310.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc01g091310.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc01g091310.2.1Uncharacterized protein (441 aa)    
Predicted Functional Partners:
Solyc12g013940.1.1
Uncharacterized protein (407 aa)
   
          0.522
Solyc08g006910.2.1
Uncharacterized protein (385 aa)
   
          0.521
Solyc12g009030.1.1
Uncharacterized protein (323 aa)
   
          0.518
Solyc07g041080.2.1
Uncharacterized protein (323 aa)
   
          0.518
Solyc02g088780.2.1
Ribosome biogenesis protein WDR12 homolog ; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit (423 aa)
   
        0.517
Solyc03g026350.2.1
Uncharacterized protein (431 aa)
   
          0.517
Solyc03g111780.1.1
Uncharacterized protein (401 aa)
   
          0.516
Solyc04g005020.2.1
Uncharacterized protein (429 aa)
   
          0.515
Solyc01g068250.2.1
Uncharacterized protein (416 aa)
   
          0.515
Solyc03g111740.2.1
Uncharacterized protein (482 aa)
   
          0.514
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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