STRINGSTRING
Solyc01g091330.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc01g091330.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc01g091330.2.1Uncharacterized protein (284 aa)    
Predicted Functional Partners:
HGO
Homogentisate 1,2-dioxygenase (463 aa)
 
 
  0.968
Solyc11g012160.1.1
Uncharacterized protein (420 aa)
   
 
  0.964
Solyc04g014730.2.1
Uncharacterized protein (483 aa)
   
 
  0.964
Solyc07g008950.2.1
Uncharacterized protein (812 aa)
     
  0.931
Solyc11g072190.1.1
Uncharacterized protein (227 aa)
     
  0.893
DDTFR10
Ripening regulated protein DDTFR10 (241 aa)
     
  0.893
Solyc01g098000.2.1
Uncharacterized protein (241 aa)
     
  0.893
Solyc01g102660.2.1
Uncharacterized protein (222 aa)
   
   
 
0.803
Solyc12g040510.1.1
Uncharacterized protein (329 aa)
     
        0.724
ArcA1
LeArcA1 protein (326 aa)
     
        0.724
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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