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101256138 protein (Solanum lycopersicum) - STRING interaction network
"101256138" - LOB domain-containing protein 18 in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
101256138LOB domain-containing protein 18 (271 aa)    
Predicted Functional Partners:
101254132
Uncharacterized protein; Aberrant lateral root formation 4 (587 aa)
           
  0.800
100301933
WOX4 (242 aa)
           
  0.798
101250153
annotation not available (230 aa)
     
 
0.739
101248888
Cellulose synthase family protein; Belongs to the glycosyltransferase 2 family. Plant cellulose synthase subfamily (1041 aa)
           
  0.736
101261338
annotation not available (196 aa)
     
 
0.734
100191131
Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5’-TGTCTC-3’ found in the auxin-responsive promoter elements (AuxREs) (1137 aa)
           
  0.649
101246732
annotation not available (811 aa)
           
  0.632
101246901
annotation not available (969 aa)
           
  0.632
tbn1
Endonuclease 1 (302 aa)
           
  0.624
101258495
annotation not available (602 aa)
           
  0.617
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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