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STRINGSTRING
Solyc01g091600.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc01g091600.2.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc01g091600.2.1annotation not available (335 aa)    
Predicted Functional Partners:
101250822
Nucleic acid-binding, OB-fold-like protein (883 aa)
           
  0.687
Solyc06g064560.2.1
Uncharacterized protein; CONTAINS InterPro DOMAIN/s- RuvA domain 2-like (InterPro-IPR010994); Has 29 Blast hits to 29 proteins in 9 species- Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 27; Viruses - 0; Other Eukaryotes - 0 (source- NCBI BLink) (245 aa)
           
  0.588
101249644
annotation not available (337 aa)
     
   
  0.566
101246707
annotation not available (325 aa)
     
   
  0.566
Solyc04g011570.2.1
annotation not available (333 aa)
     
   
  0.566
101264728
Uncharacterized protein; Pentatricopeptide repeat (PPR-like) superfamily protein (511 aa)
           
  0.566
Solyc11g069310.1.1
annotation not available (212 aa)
           
  0.550
Solyc11g069300.1.1
annotation not available (191 aa)
           
  0.550
Solyc03g031890.2.1
annotation not available (201 aa)
           
  0.550
101259226
annotation not available (134 aa)
           
  0.491
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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