STRINGSTRING
Solyc01g091610.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc01g091610.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc01g091610.1.1Uncharacterized protein (898 aa)    
Predicted Functional Partners:
Solyc12g010730.1.1
Uncharacterized protein (314 aa)
           
  0.530
Solyc10g008480.2.1
Uncharacterized protein (315 aa)
           
  0.530
Solyc07g054270.2.1
Uncharacterized protein (309 aa)
           
  0.489
Solyc12g006500.1.1
Uncharacterized protein (350 aa)
           
  0.456
Solyc08g060940.1.1
Uncharacterized protein (351 aa)
           
  0.456
Solyc03g118610.2.1
Uncharacterized protein (386 aa)
     
   
  0.440
Solyc07g005930.2.1
DNA-directed RNA polymerase ; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (992 aa)
     
 
  0.435
Solyc05g010660.2.1
DNA-directed RNA polymerase ; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (993 aa)
     
 
  0.435
Solyc02g089340.2.1
DNA-directed RNA polymerase ; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (711 aa)
     
 
  0.435
Solyc02g089330.2.1
Uncharacterized protein (314 aa)
     
 
  0.435
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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