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STRINGSTRING
101264861 protein (Solanum lycopersicum) - STRING interaction network
"101264861" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
101264861annotation not available (356 aa)    
Predicted Functional Partners:
Solyc12g010990.1.1
annotation not available (531 aa)
           
  0.590
101260154
annotation not available (486 aa)
           
  0.590
EXPA3
Expansin (267 aa)
           
  0.546
101268246
annotation not available (264 aa)
           
  0.546
104644277
Unknown protein; CONTAINS InterPro DOMAIN/s- Uncharacterised protein family UPF0546 (InterPro-IPR018908); Has 1807 Blast hits to 1807 proteins in 277 species- Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Euk /.../s - 339 (source- NCBI BLink) (132 aa)
     
 
  0.490
101265438
DNA replication complex GINS protein PSF2; PSF2; Belongs to the GINS2/PSF2 family (210 aa)
           
  0.487
101267947
Uncharacterized protein; Transcription factor DP (354 aa)
     
   
  0.436
101267504
annotation not available (504 aa)
     
   
  0.436
101251038
Uncharacterized protein; Class II aaRS and biotin synthetases superfamily protein (880 aa)
     
   
  0.436
101267019
Major facilitator superfamily protein; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family (509 aa)
     
 
  0.419
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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