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101244121 protein (Solanum lycopersicum) - STRING interaction network
"101244121" - Nucleotidyltransferase family protein in Solanum lycopersicum
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurence
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Experiments
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Textmining
[Homology]
Score
101244121Nucleotidyltransferase family protein (775 aa)    
Predicted Functional Partners:
101251550
CONTAINS InterPro DOMAIN/s- Protein of unknown function DUF985 (InterPro-IPR009327), RmlC-like jelly roll fold (InterPro-IPR014710); Has 1465 Blast hits to 1465 proteins in 584 species- Archae - 10; Bacteria - 1038; Metazoa - 19; Fungi - 43; Plants /.../Viruses - 0; Other Eukaryotes - 304 (source- NCBI BLink) (196 aa)
           
  0.762
101252826
annotation not available (1348 aa)
     
   
  0.751
104649446
annotation not available (1344 aa)
     
   
  0.751
Solyc06g051790.2.1
annotation not available (223 aa)
           
  0.745
Solyc07g052340.2.1
Uncharacterized protein; Polynucleotidyl transferase, ribonuclease H fold protein with HRDC domain (884 aa)
     
 
  0.661
101264590
annotation not available (936 aa)
           
  0.658
101253650
DIS3-like exonuclease 2; 3’-5’-exoribonuclease that specifically recognizes RNAs polyuridylated at their 3’ end and mediates their degradation. Component of an exosome-independent RNA degradation pathway that mediates degradation of cytoplasmic mRNAs that have been deadenylated and subsequently uridylated at their 3’ (1092 aa)
     
 
  0.629
101256025
Uncharacterized protein; PAP/OAS1 substrate-binding domain superfamily (849 aa)
     
   
  0.598
Solyc06g082480.2.1
annotation not available (833 aa)
     
   
  0.598
Solyc01g090860.2.1
Nucleotidyltransferase family protein (1552 aa)
     
   
  0.590
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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