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STRINGSTRING
101259987 protein (Solanum lycopersicum) - STRING interaction network
"101259987" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
101259987annotation not available (512 aa)    
Predicted Functional Partners:
Solyc06g073120.2.1
Unknown protein; CONTAINS InterPro DOMAIN/s- Protein of unknown function DUF947 (InterPro-IPR009292); Has 700 Blast hits to 631 proteins in 192 species- Archae - 0; Bacteria - 32; Metazoa - 138; Fungi - 168; Plants - 60; Viruses - 0; Other Eukaryote /.../2 (source- NCBI BLink) (257 aa)
           
  0.556
101250872
Unknown protein; INVOLVED IN- biological_process unknown; LOCATED IN- cell wall; EXPRESSED IN- 24 plant structures; EXPRESSED DURING- 15 growth stages; Has 1807 Blast hits to 1807 proteins in 277 species- Archae - 0; Bacteria - 0; Metazoa - 736; Fun /.../47; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source- NCBI BLink) (289 aa)
           
  0.438
Solyc04g080880.2.1
Uncharacterized protein; Xylem bark cysteine peptidase 3; Belongs to the peptidase C1 family (845 aa)
           
  0.426
Solyc04g009930.1.1
annotation not available (487 aa)
   
          0.418
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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