STRINGSTRING
Solyc01g094290.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc01g094290.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc01g094290.2.1Uncharacterized protein (1198 aa)    
Predicted Functional Partners:
Solyc04g006930.2.1
Uncharacterized protein (800 aa)
     
  0.827
Solyc07g014690.2.1
Uncharacterized protein (555 aa)
     
 
  0.794
HKT1;2
Sodium transporter HKT1;2 (391 aa)
     
 
  0.794
Solyc03g098140.2.1
Uncharacterized protein (343 aa)
         
  0.786
Solyc10g080080.1.1
Thioredoxin reductase (543 aa)
   
   
  0.734
Solyc04g016010.2.1
Uncharacterized protein (537 aa)
         
  0.727
Solyc12g019780.1.1
Uncharacterized protein (303 aa)
     
 
  0.724
Solyc11g039440.1.1
Uncharacterized protein (243 aa)
     
 
  0.724
Solyc10g044770.1.1
Uncharacterized protein (293 aa)
     
 
  0.724
Solyc10g006080.1.1
Sodium/hydrogen exchanger (525 aa)
     
 
  0.724
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
Server load: low (7%) [HD]