STRINGSTRING
Solyc01g094340.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc01g094340.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc01g094340.2.1Uncharacterized protein (725 aa)    
Predicted Functional Partners:
Solyc12g056940.1.1
Uncharacterized protein (2210 aa)
   
  0.998
Solyc01g008330.2.1
Uncharacterized protein (536 aa)
 
  0.997
accD
Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic ; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA (By similarity). Is up-regulated upon chromoplast differentiation, presumably for fatty acid biosynthesis (507 aa)
  0.996
Solyc04g039820.1.1
Uncharacterized protein (82 aa)
 
  0.984
Solyc00g017930.1.1
Annotation not available (250 aa)
 
  0.984
BCCP1
Biotin carboxylase carrier protein (285 aa)
 
 
  0.973
Solyc06g069530.2.1
Uncharacterized protein (261 aa)
 
 
  0.965
Solyc01g006980.2.1
Uncharacterized protein (359 aa)
   
 
  0.965
Solyc08g006560.2.1
Uncharacterized protein (381 aa)
   
 
  0.948
Solyc03g097470.2.1
Uncharacterized protein (431 aa)
   
 
  0.948
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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