STRINGSTRING
Solyc01g094620.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc01g094620.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc01g094620.2.1Uncharacterized protein (2262 aa)    
Predicted Functional Partners:
Solyc12g027870.1.1
Uncharacterized protein (336 aa)
     
 
  0.958
Solyc12g027850.1.1
Uncharacterized protein (79 aa)
     
 
  0.958
Solyc01g097320.2.1
Uncharacterized protein (1791 aa)
     
 
  0.947
Solyc06g083260.2.1
Uncharacterized protein (250 aa)
     
 
  0.947
Solyc04g081430.2.1
Uncharacterized protein (168 aa)
       
 
  0.946
Solyc03g094030.2.1
Uncharacterized protein (200 aa)
       
 
  0.935
Solyc02g080430.2.1
Uncharacterized protein (138 aa)
       
 
  0.930
Solyc12g044640.1.1
Uncharacterized protein (249 aa)
       
 
  0.926
Solyc03g121210.2.1
Uncharacterized protein (232 aa)
       
 
  0.926
Solyc08g065160.2.1
Uncharacterized protein (201 aa)
       
 
  0.903
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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