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STRINGSTRING
101262968 protein (Solanum lycopersicum) - STRING interaction network
"101262968" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
101262968Uncharacterized protein; Putative recombination initiation defects 3 (441 aa)    
Predicted Functional Partners:
Solyc03g114040.2.1
Uncharacterized protein; Putative recombination initiation defect 1 (1341 aa)
           
  0.956
Solyc06g082320.2.1
Unknown protein; Has 30 Blast hits to 30 proteins in 10 species- Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 30; Viruses - 0; Other Eukaryotes - 0 (source- NCBI BLink) (255 aa)
           
  0.877
101266559
Unknown protein; Has 1165 Blast hits to 947 proteins in 158 species- Archae - 0; Bacteria - 33; Metazoa - 631; Fungi - 90; Plants - 54; Viruses - 14; Other Eukaryotes - 343 (source- NCBI BLink) (782 aa)
           
  0.875
Solyc07g005800.2.1
annotation not available (181 aa)
           
  0.851
Solyc07g005790.2.1
annotation not available (163 aa)
           
  0.851
Solyc04g008070.1.1
Cyclin family protein; Belongs to the cyclin family (641 aa)
           
  0.833
Solyc07g065440.2.1
Spo11/DNA topoisomerase VI, subunit A protein (147 aa)
           
  0.818
Solyc01g068260.2.1
Uncharacterized protein; Transcription coactivators (983 aa)
           
  0.805
Solyc12g008680.1.1
Mnd1 family protein (242 aa)
           
  0.799
Solyc09g082790.2.1
DNA repair (Rad51) family protein; Belongs to the RecA family (334 aa)
           
  0.797
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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