STRINGSTRING
Solyc01g094790.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc01g094790.2.1" - Cysteine synthase in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc01g094790.2.1Cysteine synthase (357 aa)    
Predicted Functional Partners:
Solyc10g006040.1.1
Uncharacterized protein (365 aa)
 
  0.991
Solyc07g065340.1.1
Uncharacterized protein (331 aa)
 
  0.991
Solyc12g008780.1.1
Uncharacterized protein (293 aa)
 
  0.991
Solyc02g082850.2.1
Uncharacterized protein (356 aa)
 
  0.991
Solyc10g079720.1.1
Uncharacterized protein (469 aa)
   
  0.975
LOC543920
Cystathionine gamma synthase (540 aa)
   
  0.975
sir
Sulfite reductase (691 aa)
   
 
  0.961
Solyc12g098500.1.1
Adenosylhomocysteinase (485 aa)
     
 
  0.918
Solyc09g092390.2.1
Adenosylhomocysteinase (485 aa)
     
 
  0.918
Solyc12g008640.1.1
Uncharacterized protein (630 aa)
         
  0.907
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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