STRINGSTRING
Solyc01g095990.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc01g095990.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc01g095990.2.1Uncharacterized protein (571 aa)    
Predicted Functional Partners:
Solyc10g055450.1.1
Uncharacterized protein (1846 aa)
     
  0.981
Solyc09g007310.2.1
Uncharacterized protein (1553 aa)
     
  0.981
Solyc01g111530.2.1
Uncharacterized protein (1860 aa)
     
  0.981
Solyc07g048120.2.1
Uncharacterized protein (569 aa)
     
  0.976
Solyc03g033430.1.1
Uncharacterized protein (170 aa)
     
  0.975
Solyc02g083710.2.1
Uncharacterized protein (403 aa)
     
  0.975
UBI3
Ubiquitin-40S ribosomal protein S27a Ubiquitin 40S ribosomal protein S27a; Ubiquitin exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue of the ubiquitin tha [...] (156 aa)
     
  0.973
Solyc09g082520.2.1
40S ribosomal protein S3a (260 aa)
     
  0.969
Solyc06g072490.2.1
40S ribosomal protein S3a (261 aa)
     
  0.969
Solyc03g097900.2.1
40S ribosomal protein S3a (261 aa)
     
  0.969
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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