STRINGSTRING
Solyc01g096160.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc01g096160.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc01g096160.2.1Uncharacterized protein (1065 aa)    
Predicted Functional Partners:
Solyc04g080620.2.1
Uncharacterized protein (413 aa)
         
  0.805
Solyc02g084990.2.1
Uncharacterized protein (434 aa)
         
  0.805
Solyc01g008720.1.1
Uncharacterized protein (401 aa)
         
  0.805
Solyc10g074920.1.1
Uncharacterized protein (449 aa)
         
  0.804
HXK3
Hexokinase (499 aa)
         
    0.800
Solyc11g065220.1.1
Phosphotransferase (511 aa)
         
    0.800
Solyc11g042850.1.1
Uncharacterized protein (325 aa)
         
    0.800
Solyc11g012190.1.1
Uncharacterized protein (457 aa)
         
    0.800
FRK4
Fructokinase (375 aa)
         
    0.800
Solyc10g008300.2.1
Uncharacterized protein (444 aa)
         
    0.800
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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