STRINGSTRING
Solyc01g096490.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc01g096490.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc01g096490.2.1Uncharacterized protein (1633 aa)    
Predicted Functional Partners:
Solyc09g009490.2.1
Uncharacterized protein (426 aa)
       
 
  0.966
Solyc04g081640.1.1
Uncharacterized protein (158 aa)
       
  0.936
Solyc04g081630.1.1
Uncharacterized protein (267 aa)
       
  0.936
Solyc04g081570.2.1
Uncharacterized protein (812 aa)
       
  0.936
Solyc10g007420.2.1
Uncharacterized protein (425 aa)
   
  0.930
Solyc10g007240.1.1
Uncharacterized protein (594 aa)
   
  0.930
Solyc10g007230.1.1
Uncharacterized protein (596 aa)
   
  0.930
Solyc07g062580.2.1
Uncharacterized protein (701 aa)
       
  0.909
mek1
MAP kinase kinase (357 aa)
     
  0.907
MKK2
MAPKK (359 aa)
     
  0.907
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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