STRINGSTRING
Solyc01g096600.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc01g096600.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc01g096600.2.1Uncharacterized protein (608 aa)    
Predicted Functional Partners:
Solyc07g066060.2.1
Uncharacterized protein (313 aa)
     
  0.995
Solyc04g078830.2.1
Uncharacterized protein (802 aa)
     
  0.984
Solyc07g040790.2.1
Uncharacterized protein (435 aa)
     
  0.983
Solyc01g008990.2.1
Uncharacterized protein (246 aa)
     
  0.978
Solyc05g017890.2.1
Uncharacterized protein (1858 aa)
     
  0.978
Solyc11g072180.1.1
Uncharacterized protein (90 aa)
     
  0.978
Solyc11g073280.1.1
Uncharacterized protein (251 aa)
     
  0.962
Solyc11g011130.1.1
Uncharacterized protein (283 aa)
     
  0.962
Solyc10g086400.1.1
Uncharacterized protein (239 aa)
     
  0.962
Solyc04g014460.2.1
Uncharacterized protein (272 aa)
     
  0.962
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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