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101245499 protein (Solanum lycopersicum) - STRING interaction network
"101245499" - Nuclear matrix protein-related in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
101245499Nuclear matrix protein-related (608 aa)    
Predicted Functional Partners:
101265940
Uncharacterized protein; Transducin/WD40 repeat-like superfamily protein (313 aa)
     
  0.998
Solyc04g078830.2.1
annotation not available (802 aa)
     
  0.997
101261518
Uncharacterized protein; THO2 (1858 aa)
     
  0.996
Solyc11g072180.1.1
annotation not available (90 aa)
     
  0.992
Solyc01g008990.2.1
annotation not available (246 aa)
     
  0.992
Solyc07g040790.2.1
DWD (DDB1-binding WD40 protein) hypersensitive to ABA 1 (435 aa)
     
  0.990
101266904
annotation not available (251 aa)
     
  0.968
101256343
annotation not available (283 aa)
     
  0.968
101262878
annotation not available (239 aa)
     
  0.968
101268859
annotation not available (272 aa)
     
  0.968
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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