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Solyc01g096760.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc01g096760.2.1" - Pre-rRNA-processing protein TSR2, conserved region in Solanum lycopersicum
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
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some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Score
Solyc01g096760.2.1Pre-rRNA-processing protein TSR2, conserved region (170 aa)    
Predicted Functional Partners:
101248232
Protein serine/threonine kinases;ATP binding;catalytics (457 aa)
     
 
  0.983
101256673
Uncharacterized protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- ribosome biogenesis; LOCATED IN- nucleus; EXPRESSED IN- 22 plant structures; EXPRESSED DURING- 13 growth stages; CONTAINS InterPro DOMAIN/s- AARP2CN (InterPro-IPR012948), Protein of unknown func /.../UF663 (InterPro-IPR007034); BEST Arabidopsis thaliana protein match is- P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR-AT1G06720.1); Has 2741 Blast hits to 2088 proteins in 291 species- Archae - 2; Bacteria - 131; Metazoa - 833; Fungi - 650; Plants - 171; Viruses - 49; Other Euka [...] (791 aa)
     
 
  0.973
101251881
Unknown protein; Has 1524 Blast hits to 1298 proteins in 225 species- Archae - 9; Bacteria - 84; Metazoa - 474; Fungi - 184; Plants - 98; Viruses - 17; Other Eukaryotes - 658 (source- NCBI BLink) (517 aa)
     
 
  0.966
Solyc07g056550.2.1
Uncharacterized protein; CONTAINS InterPro DOMAIN/s- Bystin (InterPro-IPR007955); Has 475 Blast hits to 467 proteins in 210 species- Archae - 0; Bacteria - 9; Metazoa - 155; Fungi - 139; Plants - 55; Viruses - 0; Other Eukaryotes - 117 (source- NCBI BLink) (398 aa)
     
 
  0.964
101248302
annotation not available (127 aa)
     
 
  0.963
101247310
annotation not available (128 aa)
     
 
  0.963
Solyc12g015770.1.1
annotation not available (775 aa)
     
   
  0.937
Solyc08g007990.2.1
Uncharacterized protein; CONTAINS InterPro DOMAIN/s- Nin one binding (NOB1) Zn-ribbon like (InterPro-IPR014881), D-site 20S pre-rRNA nuclease (InterPro-IPR017117); Has 1807 Blast hits to 1807 proteins in 277 species- Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Pla /.../385; Viruses - 0; Other Eukaryotes - 339 (source- NCBI BLink) (642 aa)
     
   
  0.937
Solyc11g011780.1.1
60S ribosomal export protein NMD3; Acts as an adapter for the XPO1/CRM1-mediated export of the 60S ribosomal subunit (502 aa)
     
   
  0.935
Solyc06g053800.1.1
60S ribosomal export protein NMD3; Acts as an adapter for the XPO1/CRM1-mediated export of the 60S ribosomal subunit (505 aa)
     
   
  0.935
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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