STRINGSTRING
Solyc01g096860.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc01g096860.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc01g096860.1.1Uncharacterized protein (443 aa)    
Predicted Functional Partners:
Solyc05g052960.2.1
Uncharacterized protein (408 aa)
       
      0.583
Solyc12g008970.1.1
O-acyltransferase (463 aa)
     
   
  0.497
Solyc07g040740.2.1
O-acyltransferase (514 aa)
     
   
  0.497
Solyc06g069530.2.1
Uncharacterized protein (261 aa)
     
   
  0.473
Solyc11g072070.1.1
Uncharacterized protein (408 aa)
       
      0.450
Solyc09g072980.2.1
Uncharacterized protein (412 aa)
       
      0.450
Solyc01g009060.2.1
Uncharacterized protein (405 aa)
       
      0.450
Solyc02g094460.1.1
Uncharacterized protein (274 aa)
     
   
  0.424
Solyc07g041210.2.1
Uncharacterized protein (695 aa)
     
   
  0.403
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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