• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
101251231 protein (Solanum lycopersicum) - STRING interaction network
"101251231" - Integrase-type DNA-binding superfamily protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
101251231Integrase-type DNA-binding superfamily protein (443 aa)    
Predicted Functional Partners:
Solyc02g094460.1.1
Uncharacterized protein; AP2/B3-like transcriptional factor family protein (274 aa)
           
  0.909
101259549
Biotin carboxyl carrier protein of acetyl-CoA carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA (261 aa)
     
   
  0.883
101258197
CONTAINS InterPro DOMAIN/s- Protein of unknown function DUF482 (InterPro-IPR007434), Acyl-CoA N-acyltransferase (InterPro-IPR016181); Has 2165 Blast hits to 2163 proteins in 543 species- Archae - 0; Bacteria - 1044; Metazoa - 0; Fungi - 0; Plants - /.../ruses - 0; Other Eukaryotes - 1088 (source- NCBI BLink) (466 aa)
           
  0.790
Solyc12g008970.1.1
annotation not available (463 aa)
           
  0.777
101264840
annotation not available (514 aa)
           
  0.777
BCCP1
Biotin carboxyl carrier protein of acetyl-CoA carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA (285 aa)
           
  0.764
GPAT
Glycerol-3-phosphate acyltransferase, chloroplastic; Esterifies acyl-group from acyl-ACP to the sn-1 position of glycerol-3-phosphate. The enzyme from chilling-resistant plants discriminates against non-fluid palmitic acid and selects oleic acid whereas the enzyme from sensitive plants accepts both fatty acids; Belongs to the GPAT/DAPAT family (470 aa)
           
  0.762
101265216
Uncharacterized protein; HD-ZIP IV family of homeobox-leucine zipper protein with lipid-binding START domain (775 aa)
           
  0.753
101256206
Uncharacterized protein; Glycerol-3-phosphate acyltransferase 9 (371 aa)
           
  0.749
101249278
Acyl-[acyl-carrier-protein] hydrolase; Plays an essential role in chain termination during de novo fatty acid synthesis (369 aa)
           
  0.740
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
Server load: low (8%) [HD]