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STRINGSTRING
Solyc01g096980.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc01g096980.1.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc01g096980.1.1annotation not available (348 aa)    
Predicted Functional Partners:
Solyc09g083020.1.1
annotation not available (157 aa)
     
   
  0.750
101261779
annotation not available (237 aa)
           
  0.614
101259281
Uncharacterized protein; Subtilisin-like serine endopeptidase family protein (744 aa)
     
   
  0.583
Solyc03g079890.1.1
annotation not available (640 aa)
     
   
  0.583
101252901
Heat shock protein 70 (Hsp 70) family protein (890 aa)
   
 
  0.567
Solyc01g106950.2.1
Uncharacterized protein; Myosin heavy chain-related (611 aa)
           
  0.564
Solyc09g064490.1.1
annotation not available (824 aa)
     
   
  0.551
101261760
Uncharacterized protein; Subtilisin-like serine protease 2 (772 aa)
     
   
  0.551
101244548
Subtilisin-like protein (757 aa)
     
   
  0.524
101253818
annotation not available (146 aa)
           
  0.454
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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