STRINGSTRING
Solyc01g097110.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc01g097110.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc01g097110.1.1Uncharacterized protein (1500 aa)    
Predicted Functional Partners:
Solyc03g043870.2.1
Uncharacterized protein (286 aa)
       
  0.983
Solyc01g066610.2.1
Uncharacterized protein (1430 aa)
     
  0.982
Solyc09g018710.2.1
Uncharacterized protein (410 aa)
     
 
  0.743
Solyc09g018690.2.1
Uncharacterized protein (507 aa)
     
 
  0.743
Solyc08g074610.1.1
Uncharacterized protein (550 aa)
     
 
  0.743
Solyc07g042010.2.1
Uncharacterized protein (685 aa)
     
 
  0.743
Solyc05g014690.1.1
Uncharacterized protein (1002 aa)
     
 
  0.743
Solyc02g088430.1.1
Uncharacterized protein (541 aa)
     
 
  0.743
Solyc01g103960.2.1
Uncharacterized protein (1180 aa)
     
 
  0.743
Solyc01g100280.2.1
Uncharacterized protein (704 aa)
     
 
  0.743
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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