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STRINGSTRING
pi1 protein (Solanum lycopersicum) - STRING interaction network
"pi1" - Wound-induced protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pi1Wound-induced protein (212 aa)    
Predicted Functional Partners:
101248479
annotation not available (247 aa)
     
   
  0.687
101257258
Uncharacterized protein; RAB GTPASE HOMOLOG B18 (209 aa)
           
  0.595
101266908
annotation not available (659 aa)
           
  0.595
Solyc10g074460.1.1
annotation not available (194 aa)
     
   
  0.578
Solyc10g074360.1.1
annotation not available (154 aa)
     
   
  0.578
Solyc10g068350.1.1
annotation not available (86 aa)
     
   
  0.578
Solyc10g055780.1.1
annotation not available (170 aa)
     
   
  0.578
Solyc02g082960.2.1
annotation not available (273 aa)
     
   
  0.578
CHI14
Basic endochitinase; Defense against chitin-containing fungal pathogens; Belongs to the glycosyl hydrolase 19 family. Chitinase class I subfamily (263 aa)
     
   
  0.578
100191111
PR1 protein ; Belongs to the CRISP family (179 aa)
     
   
  0.575
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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