STRINGSTRING
Solyc01g097450.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc01g097450.2.1" - Uncharacterized protein in Solanum lycopersicum
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc01g097450.2.1Uncharacterized protein (176 aa)    
Predicted Functional Partners:
Solyc10g080080.1.1
Thioredoxin reductase (543 aa)
       
  0.832
Solyc04g016010.2.1
Uncharacterized protein (537 aa)
       
  0.832
Solyc06g067990.2.1
Uncharacterized protein (419 aa)
     
      0.665
Solyc04g079200.2.1
Uncharacterized protein (312 aa)
     
      0.665
Solyc07g009140.2.1
Uncharacterized protein (386 aa)
     
        0.656
Solyc10g037980.1.1
Uncharacterized protein (132 aa)
       
 
  0.636
Solyc03g118910.1.1
T-complex protein 1 subunit delta ; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis (539 aa)
     
      0.620
Solyc03g122370.2.1
Uncharacterized protein (888 aa)
       
      0.607
Solyc01g091890.2.1
Ubiquitin-related modifier 1 homolog ; Acts as a sulfur carrier required for 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of cytosolic tRNA(Lys), tRNA(Glu) and tRNA(Gln). Serves as sulfur donor in tRNA 2- thiolation reaction by being thiocarboxylated (-COSH) at its C- terminus by MOCS3. The sulfur is then transferred to tRNA to form 2-thiolation of mcm(5)S(2)U. Also acts as a ubiquitin-like protein (UBL) that is covalently conjugated via an isopeptide bond to lysine residues of target proteins. The thiocarboxylated form serves as substrate for conjugation and oxidative stress s [...] (99 aa)
       
      0.607
Solyc10g082030.1.1
Uncharacterized protein (267 aa)
       
  0.603
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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