STRINGSTRING
Solyc01g097860.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc01g097860.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc01g097860.2.1Uncharacterized protein (288 aa)    
Predicted Functional Partners:
Solyc03g034170.2.1
Uncharacterized protein (285 aa)
   
        0.560
Solyc07g054820.2.1
Uncharacterized protein (250 aa)
   
        0.524
Solyc02g068930.2.1
Uncharacterized protein (179 aa)
   
          0.511
Solyc02g087230.2.1
Uncharacterized protein (149 aa)
   
        0.507
Solyc01g098640.2.1
Uncharacterized protein (289 aa)
   
        0.504
Solyc07g042820.2.1
Uncharacterized protein (179 aa)
   
 
      0.496
Solyc01g096240.2.1
Uncharacterized protein (276 aa)
   
          0.482
Solyc04g039870.1.1
Uncharacterized protein (134 aa)
   
          0.481
Solyc05g012700.2.1
Uncharacterized protein (291 aa)
   
        0.478
Solyc07g007280.2.1
Uncharacterized protein (251 aa)
   
          0.463
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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