STRINGSTRING
Solyc01g097910.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc01g097910.2.1" - Uncharacterized protein in Solanum lycopersicum
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc01g097910.2.1Uncharacterized protein (206 aa)    
Predicted Functional Partners:
Solyc10g080080.1.1
Thioredoxin reductase (543 aa)
   
   
  0.512
Solyc04g016010.2.1
Uncharacterized protein (537 aa)
   
   
  0.505
Solyc01g103950.2.1
Uncharacterized protein (553 aa)
              0.469
Solyc02g081910.1.1
DNA topoisomerase ; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5’-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3’-OH DNA strand (1175 aa)
           
  0.451
Solyc00g042130.1.1
Annotation not available (704 aa)
   
   
  0.438
Solyc11g042640.1.1
Uncharacterized protein (276 aa)
     
 
  0.432
Solyc10g082030.1.1
Uncharacterized protein (267 aa)
   
   
  0.415
Solyc01g007740.2.1
Uncharacterized protein (267 aa)
   
   
  0.415
Solyc03g096040.2.1
Uncharacterized protein (219 aa)
   
   
  0.409
Solyc06g050980.2.1
Ferritin ; Stores iron in a soluble, non-toxic, readily available form. Important for iron homeostasis. Iron is taken up in the ferrous form and deposited as ferric hydroxides after oxidation (251 aa)
         
  0.400
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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