STRINGSTRING
Solyc01g098090.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc01g098090.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc01g098090.2.1Uncharacterized protein (709 aa)    
Predicted Functional Partners:
Solyc04g056290.2.1
Uncharacterized protein (369 aa)
     
  0.981
Solyc01g105240.2.1
Uncharacterized protein (366 aa)
     
  0.981
Solyc10g086070.1.1
Uncharacterized protein (544 aa)
     
  0.815
Solyc09g007670.2.1
Uncharacterized protein (550 aa)
     
  0.815
UBI3
Ubiquitin-40S ribosomal protein S27a Ubiquitin 40S ribosomal protein S27a; Ubiquitin exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue of the ubiquitin tha [...] (156 aa)
       
      0.624
Solyc06g009650.2.1
Uncharacterized protein (778 aa)
     
   
  0.562
Solyc01g079490.2.1
Uncharacterized protein (777 aa)
     
   
  0.562
Solyc03g116540.1.1
Uncharacterized protein (497 aa)
           
  0.532
Solyc04g074470.1.1
Uncharacterized protein (309 aa)
           
  0.491
Solyc01g105410.2.1
Uncharacterized protein (301 aa)
           
  0.491
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
Server load: low (9%) [HD]