STRINGSTRING
Solyc01g098840.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc01g098840.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc01g098840.2.1Uncharacterized protein (392 aa)    
Predicted Functional Partners:
Solyc08g076140.2.1
Uncharacterized protein (509 aa)
   
 
  0.973
Solyc06g066310.2.1
Uncharacterized protein (509 aa)
   
 
  0.973
Solyc02g082260.2.1
HMGR CoA reductase (601 aa)
       
  0.971
HMG2
3-hydroxy-3-methylglutaryl-coenzyme A reductase 2 ; Catalyzes the synthesis of mevalonate. The specific precursor of all isoprenoid compounds present in plants (620 aa)
       
  0.971
Solyc03g032020.2.1
3-hydroxy-3-methylglutaryl coenzyme A reductase (555 aa)
       
  0.970
Solyc03g032010.2.1
3-hydroxy-3-methylglutaryl coenzyme A reductase (503 aa)
       
  0.970
MDC
Mevalonate disphosphate decarboxylase (422 aa)
 
 
  0.908
Solyc04g009650.2.1
Uncharacterized protein (418 aa)
 
 
  0.907
HMGS
3-hydroxy-3-methylglutaryl coenzyme A synthase (462 aa)
 
   
  0.805
Solyc12g056450.1.1
Uncharacterized protein (462 aa)
 
   
  0.803
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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