STRINGSTRING
Solyc01g098990.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc01g098990.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc01g098990.2.1Uncharacterized protein (308 aa)    
Predicted Functional Partners:
Solyc02g005200.2.1
Uncharacterized protein (365 aa)
   
        0.584
Solyc06g007760.2.1
Uncharacterized protein (220 aa)
   
        0.582
Solyc02g021000.2.1
Uncharacterized protein (183 aa)
   
        0.551
Solyc05g006440.2.1
Uncharacterized protein (197 aa)
   
        0.546
Solyc04g009370.2.1
Uncharacterized protein (243 aa)
   
        0.541
Solyc07g052290.1.1
Uncharacterized protein (444 aa)
   
        0.532
Solyc11g006060.1.1
Uncharacterized protein (451 aa)
   
        0.524
Solyc03g034170.2.1
Uncharacterized protein (285 aa)
   
        0.516
Solyc12g009430.1.1
Uncharacterized protein (320 aa)
   
        0.509
Solyc12g015680.1.1
Uncharacterized protein (197 aa)
   
        0.506
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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