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Solyc01g099220.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc01g099220.2.1" - DNA polymerase in Solanum lycopersicum
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc01g099220.2.1DNA polymerase; Recovery protein 3 (1947 aa)    
Predicted Functional Partners:
Solyc01g107510.2.1
DNA repair protein REV1; Deoxycytidyl transferase involved in DNA repair. Transfers a dCMP residue from dCTP to the 3’-end of a DNA primer in a template-dependent reaction. May assist in the first step in the bypass of abasic lesions by the insertion of a nucleotide opposite the lesion. Required for normal induction of mutations by physical and chemical agents (1045 aa)
     
 
  0.998
101248333
DNA-binding HORMA family protein (202 aa)
       
 
  0.996
Solyc01g034150.2.1
Uncharacterized protein; Y-family DNA polymerase H (713 aa)
     
 
  0.977
101256634
Uncharacterized protein; Ataxia telangiectasia-mutated and RAD3-related (2728 aa)
     
 
  0.972
101259745
DNA polymerase alpha subunit B; May play an essential role at the early stage of chromosomal DNA replication by coupling the polymerase alpha/primase complex to the cellular replication machinery (617 aa)
     
 
  0.971
Solyc03g063340.2.1
Uncharacterized protein; DNA polymerase delta small subunit (430 aa)
     
 
  0.970
101258997
Uncharacterized protein; DNA-directed DNA polymerases (542 aa)
     
 
  0.961
pcna
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase’s processibility during elongation of the leading strand (264 aa)
   
 
  0.953
101266715
DNA primase large subunit; DNA primase is the polymerase that synthesizes small RNA primers for the Okazaki fragments made during discontinuous DNA replication (459 aa)
     
 
  0.951
Solyc03g098250.2.1
DNA polymerase epsilon subunit; Participates in DNA repair and in chromosomal DNA replication (529 aa)
     
 
  0.940
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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