STRINGSTRING
Solyc01g099310.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc01g099310.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc01g099310.2.1Uncharacterized protein (328 aa)    
Predicted Functional Partners:
Solyc04g071310.2.1
Uncharacterized protein (188 aa)
     
  0.991
Solyc06g008970.2.1
Uncharacterized protein (758 aa)
     
  0.989
Solyc08g081280.2.1
Uncharacterized protein (419 aa)
     
  0.987
Solyc06g064890.2.1
Uncharacterized protein (250 aa)
     
  0.975
Solyc07g005950.2.1
Uncharacterized protein (955 aa)
       
      0.966
Solyc03g119790.2.1
Uncharacterized protein (472 aa)
     
  0.963
Solyc12g027870.1.1
Uncharacterized protein (336 aa)
     
  0.960
Solyc12g027850.1.1
Uncharacterized protein (79 aa)
     
  0.960
Solyc06g071450.2.1
Uncharacterized protein (290 aa)
     
  0.955
Solyc07g063130.2.1
Uncharacterized protein (722 aa)
     
  0.901
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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