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STRINGSTRING
101246966 protein (Solanum lycopersicum) - STRING interaction network
"101246966" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
101246966annotation not available (328 aa)    
Predicted Functional Partners:
101265536
Uncharacterized protein; Cyclin-dependent kinase-activating kinase assembly factor-related / CDK-activating kinase assembly factor-related (188 aa)
     
 
  0.987
101255497
RAD3-like DNA-binding helicase protein (758 aa)
     
 
  0.981
101253215
annotation not available (419 aa)
     
 
  0.968
101258663
Uncharacterized protein; Basal transcription factor complex subunit-related (290 aa)
     
 
  0.961
101251518
annotation not available (608 aa)
     
 
  0.959
101244148
RNA polymerase II transcription factor B subunit 2; Component of the core-TFIIH basal transcription factor involved in nucleotide excision repair (NER) of DNA (453 aa)
     
 
  0.957
Solyc08g079610.2.1
annotation not available (70 aa)
     
 
  0.954
101251406
annotation not available (768 aa)
     
 
  0.953
Solyc07g005950.2.1
Uncharacterized protein; Tetratricopeptide repeat (TPR)-like superfamily protein (955 aa)
       
      0.939
GTF2H2
Uncharacterized protein; General transcription factor II H2 (316 aa)
     
 
  0.934
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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