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Solyc01g099400.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc01g099400.2.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc01g099400.2.1annotation not available (317 aa)    
Predicted Functional Partners:
101246793
ThiF family protein (715 aa)
     
 
  0.850
Solyc01g108160.2.1
Uncharacterized protein; Autophagy 2 (2028 aa)
     
 
  0.824
atg6
Hop-interacting protein THI040 (523 aa)
     
 
  0.769
Solyc04g008630.2.1
Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle (899 aa)
     
   
  0.652
101254702
annotation not available (737 aa)
     
   
  0.642
101268268
annotation not available (864 aa)
     
   
  0.642
SlATG4
annotation not available (391 aa)
     
   
  0.614
Solyc06g034160.2.1
Autophagy-related protein 3; Autophagy 3 (APG3) (313 aa)
     
   
  0.613
101267455
Bifunctional dihydrofolate reductase-thymidylate synthase; Bifunctional enzyme. Involved in de novo dTMP biosynthesis. Key enzyme in folate metabolism (527 aa)
       
      0.604
101259890
Thioredoxin superfamily protein (132 aa)
       
      0.596
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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