STRINGSTRING
Solyc01g099620.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc01g099620.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc01g099620.2.1Uncharacterized protein (865 aa)    
Predicted Functional Partners:
Solyc02g083850.2.1
Uncharacterized protein (570 aa)
     
   
  0.697
Solyc10g076900.1.1
Uncharacterized protein (501 aa)
           
  0.690
Solyc10g074570.1.1
Uncharacterized protein (557 aa)
           
  0.690
Solyc07g053170.2.1
Uncharacterized protein (601 aa)
           
  0.690
Solyc03g113390.2.1
Hop-interacting protein THI080 (538 aa)
           
  0.690
Solyc01g104530.2.1
Uncharacterized protein (665 aa)
           
  0.690
SERK3B
Somatic embryogenesis receptor kinase 3B (616 aa)
       
 
  0.588
Solyc12g094470.1.1
Uncharacterized protein (543 aa)
     
 
  0.569
Solyc12g094460.1.1
Uncharacterized protein (544 aa)
     
 
  0.569
Solyc12g056820.1.1
Uncharacterized protein (567 aa)
     
 
  0.569
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
Server load: low (21%) [HD]