STRINGSTRING
Solyc01g099890.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc01g099890.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc01g099890.2.1Uncharacterized protein (181 aa)    
Predicted Functional Partners:
Solyc12g008910.1.1
Translation machinery-associated protein 22 (187 aa)
     
 
  0.968
Solyc07g039450.2.1
Translation machinery-associated protein 22 (187 aa)
     
 
  0.968
Solyc10g006470.2.1
Uncharacterized protein (113 aa)
     
 
  0.838
Solyc10g006280.1.1
Uncharacterized protein (123 aa)
     
 
  0.838
Solyc07g064620.1.1
Uncharacterized protein (112 aa)
     
 
  0.838
Solyc07g064150.2.1
Uncharacterized protein (113 aa)
     
 
  0.838
Solyc03g031810.2.1
Uncharacterized protein (113 aa)
     
 
  0.838
Solyc03g119790.2.1
Uncharacterized protein (472 aa)
       
      0.601
Solyc10g078450.1.1
Uncharacterized protein (44 aa)
   
        0.522
Solyc06g072280.2.1
Uncharacterized protein (88 aa)
   
        0.407
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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