• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
101246486 protein (Solanum lycopersicum) - STRING interaction network
"101246486" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
101246486Uncharacterized protein; Pentatricopeptide repeat (PPR-like) superfamily protein (605 aa)    
Predicted Functional Partners:
101250912
Glycine-rich protein (554 aa)
           
  0.885
104649487
Ankyrin repeat family protein (172 aa)
           
  0.768
Solyc06g042950.2.1
annotation not available (639 aa)
           
  0.656
101264102
Unknown protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- biological_process unknown; LOCATED IN- chloroplast, plant-type cell wall; EXPRESSED IN- 22 plant structures; EXPRESSED DURING- 13 growth stages; Has 53 Blast hits to 53 protein /.../4 species- Archae - 0; Bacteria - 27; Metazoa - 0; Fungi - 0; Plants - 26; Viruses - 0; Other Eukaryotes - 0 (source- NCBI BLink) (275 aa)
           
  0.643
101267465
Unknown protein; BEST Arabidopsis thaliana protein match is- unknown protein (TAIR-AT4G34090.1); Has 73 Blast hits to 73 proteins in 21 species- Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 65; Viruses - 0; Other Eukaryotes - 8 (source /.../ BLink) (344 aa)
           
  0.636
Solyc07g054190.2.1
Lumazine-binding family protein (306 aa)
           
  0.620
101244021
CAAX amino terminal protease family protein (369 aa)
     
   
  0.572
101246145
Uncharacterized protein; UDP-glucose pyrophosphorylase 3 (867 aa)
           
  0.572
Solyc06g054530.2.1
annotation not available (186 aa)
           
  0.560
Solyc01g067630.2.1
annotation not available (197 aa)
           
  0.560
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
Server load: low (10%) [HD]