STRINGSTRING
Solyc01g100610.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc01g100610.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc01g100610.2.1Uncharacterized protein (584 aa)    
Predicted Functional Partners:
Solyc12g094470.1.1
Uncharacterized protein (543 aa)
       
  0.559
Solyc12g094460.1.1
Uncharacterized protein (544 aa)
       
  0.559
Solyc12g056820.1.1
Uncharacterized protein (567 aa)
       
  0.559
Solyc11g065970.1.1
Uncharacterized protein (195 aa)
       
  0.559
Solyc11g062440.1.1
Uncharacterized protein (573 aa)
       
  0.559
Solyc11g008860.1.1
Uncharacterized protein (555 aa)
       
  0.559
Solyc11g008030.1.1
Uncharacterized protein (732 aa)
       
  0.559
Solyc10g085090.1.1
Uncharacterized protein (557 aa)
       
  0.559
Solyc10g076830.1.1
Urishiol oxidase ; Lignin degradation and detoxification of lignin-derived products (556 aa)
       
  0.559
Solyc09g055930.2.1
Uncharacterized protein (584 aa)
       
  0.559
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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